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What Makes RNA Reactive?

Published in Molecular Biology 2 mins read

The primary factor contributing to RNA's reactivity is the presence of a hydroxyl group (-OH) on the 2' carbon of its ribose sugar.

Here's a more detailed explanation:

RNA's reactivity stems from key structural differences compared to DNA, mainly concerning their sugar component and overall structure.

Key Differences Contributing to RNA Reactivity:

  • 2'-Hydroxyl Group: RNA contains ribose sugar, which has a hydroxyl group (-OH) attached to the 2' carbon. DNA contains deoxyribose, which lacks this -OH group (hence "deoxy"). This extra hydroxyl group makes RNA more susceptible to hydrolysis (chemical breakdown by water) and participate in chemical reactions. The -OH group can act as a nucleophile, attacking other molecules.

  • Single-Stranded Structure: While DNA typically exists as a stable double helix, RNA is usually single-stranded. This exposes the RNA bases to potential interactions and modifications. While RNA can form complex secondary and tertiary structures through intramolecular base pairing, its inherent single-stranded nature contributes to its instability and reactivity. The single-stranded nature allows for easier access for enzymes and other molecules to react with the RNA molecule.

Feature DNA RNA
Sugar Deoxyribose (lacks 2'-OH) Ribose (has 2'-OH)
Structure Double-stranded helix Typically single-stranded
Reactivity Relatively stable More reactive and less stable
Primary Role Long-term storage of genetic information Gene expression, regulation, catalysis

Consequences of Increased Reactivity:

The increased reactivity of RNA has several consequences:

  • Lower Stability: RNA is generally less stable than DNA, making it suitable for temporary roles like carrying genetic information from DNA to ribosomes during protein synthesis.
  • Catalytic Activity (Ribozymes): The reactive hydroxyl group allows RNA to act as a catalyst (ribozymes), a function not generally associated with DNA.

In summary, the 2'-OH group on ribose is the primary reason RNA is more reactive and less stable than DNA. This reactivity, combined with its single-stranded structure, makes RNA well-suited for its diverse roles in gene expression and regulation.